STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gluAATP-binding protein of ABC transporter for glutamate; COG family: ABC-type polar amino acidtransport system_ ATPase component; Orthologue of BL0021; PFAM_ID: ABC_tran. (265 aa)    
Predicted Functional Partners:
gluD
Permease protein of ABC transporter for glutamate; COG family: ABC-type amino acid transportsystem_ permease component; Orthologue of BL0024; PFAM_ID: BPD_transp.
 
 0.999
gluC
Permease protein of ABC transporter for glutamate; COG family: ABC-type amino acid transportsystem_ permease component; Orthologue of BL0023; PFAM_ID: BPD_transp.
 
 0.997
gluB
COG family: ABC-type amino acid transportsystem_ periplasmic component; Orthologue of BL0022; PFAM_ID: SBP_bac_3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.994
BAD_0577
Similar to glutamine ABC transporter (binding and transport protein); Orthologue of lin0840.
 0.977
BAD_0865
Solute binding protein of ABC transporter system; COG family: ABC-type amino acid transport system_periplasmic component; Orthologue of BL1449; PFAM_ID: SBP_bac_3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.973
BAD_0578
Putative amino acid ABC transporter; ATP-binding protein; Orthologue of SMU.805c.
 
  
 
0.948
BAD_1258
Hypothetical protein.
  0.937
BAD_0471
COG family: ABC-type amino acid transport system_permease component; Orthologue of BL1177.
  0.934
BAD_0503
COG family: ABC-type amino acid transport system_permease component; Orthologue of BL0074; PFAM_ID: BPD_transp.
  0.918
BAD_1192
ATP-binding protein of ABC transporter; COG family: ABC-type multidrug_protein_lipidtransport system_ ATPase component; Orthologue of BL1766; PFAM_ID: ABC_membrane; PFAM_ID: ABC_tran.
 
     
0.899
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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