STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAD_0602Regulatory proteins; AsnC/Lrp; Orthologue of Tfu_1373. (339 aa)    
Predicted Functional Partners:
cbiO2
ABC-type cobalt transport system, ATPase component; Orthologue of TTE1589.
       0.827
BAD_0601
Cobalt transport protein; Orthologue of Moth_0708.
       0.827
ptsG
COG family:phosphotransferase system IIb components; Glucose-permease IIABC; Orthologue of BL1632; PFAM_ID: PTS_EIIA_1; PFAM_ID: PTS_EIIC; PFAM_ID:PTS_EIIB; Phosphotransferase enzymeII_ ABC component.
   
 
  0.644
BAD_0603
Possible ATP binding protein of ABC transporter; COG family: ABC-type transport systems_ involved inlipoprotein release_ ATPase components; Orthologue of BL0932; PFAM_ID: ABC_tran.
       0.550
BAD_0599
Hypothetical protein; Orthologue of TK2102.
       0.527
BAD_0604
Possible transport protein; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0931; PFAM_ID: DUF214.
       0.459
gltB
Glutamate synthase [NADPH] large subunit; Orthologue of Rv3859c_BL0834; ProbablegltB_ ferredoxin-dependent glutamate synthase largesubunit (EC 1.4.1.13).
     
 0.439
BAD_0736
Hypothetical protein; Orthologue of BL0695.
  
 
 0.436
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.