Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAD_0664Hypothetical protein; COG family: predicted amidophosphoribosyltransferases; Orthologue of BL1003; PFAM_ID: Pribosyltran. (228 aa)    
Predicted Functional Partners:
xerC
Probable integrase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.771
BAD_0663
Hypothetical protein; COG family: predicted hydrolases of the Hadsuperfamily; Orthologue of BL1004.
       0.727
tyrA
COG family: prephenate dehydrogenase; Orthologue of BL1382; PFAM_ID: PDH.
   
    0.723
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.703
nagA
COG family:N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; Orthologue of BL1344; PFAM_ID:NagA.
  
    0.669
rgpDc
Protein possibly involved in ATP-driven polysaccharide export; COG family: ABC-type polysaccharide_polyolphosphate transport system_ ATPase component; Orthologue of BL0207; PFAM_ID:ABC_tran.
   
    0.662
BAD_0662
Hypothetical protein; Orthologue of BL1005.
       0.612
BAD_1455
Hypothetical protein; COG family: protoporphyrinogen oxidase; Orthologue of BL0399.
  
    0.605
BAD_0594
Hypothetical protein; COG family: predicted Rossmann-foldnucleotide-binding protein involved in DNA uptake; Orthologue of BL0937; PFAM_ID: SMF.
  
 
 0.601
ribD
Riboflavin biosynthesis protein RibD; Orthologue of SAK_0872; identified by similarity to SP:P17618.
     
 0.577
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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