Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAD_0752Probable ATP binding protein of ABC transporter; COG family: ABC-type molybdenum transport system_ATPase component_photorepair protein PhrA; Orthologue of BL0825; PFAM_ID:ABC_tran. (301 aa)    
Predicted Functional Partners:
BAD_0753
Hypothetical protein; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
 
     0.685
BAD_0625
COG family: ABC-type multidrug_protein_lipidtransport system_ ATPase component; Orthologue of BL0064; PFAM_ID: ABC_tran.
  
     0.656
BAD_0750
Hypothetical protein; Orthologue of BL0827.
       0.606
glgA
COG family: predicted glycosyltransferases; Orthologue of BL0826; PFAM_ID: Glycos_transf_1.
 
     0.604
BAD_0955
COG family: ABC-type cobalt transport system_ATPase component; Orthologue of BL0049; PFAM_ID: ABC_tran.
  
     0.600
BAD_0754
Hypothetical protein; COG family: phosphohistidine phosphatase SixA; Orthologue of BL0799; PFAM_ID: PGAM.
       0.596
gltB
Glutamate synthase [NADPH] large subunit; Orthologue of Rv3859c_BL0834; ProbablegltB_ ferredoxin-dependent glutamate synthase largesubunit (EC 1.4.1.13).
       0.534
arc
Probable Aaa-family ATPase; COG family: ATPases of the Aaa+ class; Orthologue of BL1794; PFAM_ID:AAA.
  
     0.487
gltD
Glutamate synthase [NADPH] small subunit; COG family: NADPH-dependent glutamatesynthase beta chain and related oxidoreductases; Orthologue of BL0833; PFAM_ID: pyr_redox; PFAM_ID:FAD_binding_3.
       0.437
msiK
Similar to ATP binding protein of ABC transporter; COG family: ABC-typesugar_spermidine_putrescine_iron_thiamine transportsystems_ ATPase component; Orthologue of BL0341; PFAM_ID: ABC_tran; Belongs to the ABC transporter superfamily.
     
  0.410
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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