Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAD_0772ABC transporter; ATP-binding protein; Orthologue of SP1653. (233 aa)    
Predicted Functional Partners:
BAD_0085
COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0155; PFAM_ID: DUF214.
 
  0.917
BAD_0770
ABC transporter; Identified by match to protein family HMM PF02687;match to protein family HMM TIGR01612; Orthologue of LMOf2365_1233; Permease protein.
 
   0.889
BAD_0604
Possible transport protein; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0931; PFAM_ID: DUF214.
 
 0.780
nnrE
Hypothetical protein; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Belongs to the NnrE/AIBP family.
       0.604
BAD_0512
Protein with weak similarity to components of ABC transporter; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL1133; PFAM_ID: DUF214.
  0.601
BAD_1065
Putative ABC transport system integral membrane protein; Orthologue of BL0932_SCO3110_nfa46550.
  
  0.572
BAD_0695
Hypothetical protein; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0888; PFAM_ID: DUF214.
  
  0.563
BAD_0891
ATP binding protein of ABC transporter similar to Vex1; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0268; PFAM_ID: DUF214.
  
  0.563
BAD_1518
COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components.
  
  0.563
BAD_0890
ABC-type transporter similar to Vex3; COG family: ABC-type transport systems_ involved inlipoprotein release_ permease components; Orthologue of BL0269; PFAM_ID: DUF214.
  
   0.556
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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