Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAD_0933Acyl-CoA reductase-like protein; Orthologue of BL0514. (380 aa)    
Predicted Functional Partners:
BAD_0934
Possible acyl-CoA reductase; Orthologue of BL0513.
 
 0.988
BAD_0319
Acetaldehyde dehydrogenase; Orthologue of ECs1741; Similar to ADHE_ECOLI gi|1787493 (conserved in Escherichia coli K-12); In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.829
BAD_0932
Hypothetical transmembrane protein in xanthine/uracil permeases family; COG family: xanthine_uracil permeases; Orthologue of BL0515; PFAM_ID:xan_ur_permease.
  
    0.712
BAD_0935
3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-acyl carrier protein reductase; COGfamily: dehydrogenases with different specificities(related to short-chain alcohol dehydrogenases); Orthologue of BL0512; PFAM_ID:adh_short.
     
 0.674
BAD_0936
Hypothetical protein; Orthologue of gbs1997; Similar to unknown protein; Belongs to the LOG family.
       0.556
mrp
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
    
 0.492
LivF
ABC-type branched-chain amino acid transport systems ATPase component; Orthologue of Tfu_1185.
  
 
  0.454
BAD_0447
COG family: ABC-type branched-chain amino acidtransport systems_ ATPase component; Orthologue of BL1718.
  
 
  0.454
gatA
glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
  0.439
BAD_0715
Hypothetical protein; COG family: putative aromatic ring hydroxylatingenzyme; Orthologue of BL0867; PFAM_ID: DUF59.
    
 0.425
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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