Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
aglA-2Probable alpha-1,4-glucosidase; COG family: glycosidases; Orthologue of BL0529; PFAM_ID:alpha-amylase. (591 aa)    
Predicted Functional Partners:
ptsG
COG family:phosphotransferase system IIb components; Glucose-permease IIABC; Orthologue of BL1632; PFAM_ID: PTS_EIIA_1; PFAM_ID: PTS_EIIC; PFAM_ID:PTS_EIIB; Phosphotransferase enzymeII_ ABC component.
  
 
 0.918
agl
Oligo-1,6-glucosidase; COG family:glycosidases; Dextrin 6-alpha-D-glucanohydrolase; Orthologue of BL1526; PFAM_ID: alpha-amylase; Sucrase-isomaltase.
  
  
 
0.642
BAD_0972
Possible solute binding protein of ABC transporter; COG family: sugar-binding periplasmicproteins_domains; Orthologue of BL0141; PFAM_ID: SBP_bacterial_1.
  
    0.618
amyA4
Putative alpha-amylase; Orthologue of SAV5981.
 
 
  0.605
pulA
Pullulanase; Orthologue of BCZK2463.
 
 
  0.578
malQ1
Amylomaltase; COG family:4-alpha-glucanotransferase; Orthologue of BL1570; PFAM_ID: 4A_glucanotrans.
  
 
 0.571
malQ
Amylomaltase; COG family:4-alpha-glucanotransferase; Orthologue of BL0527; PFAM_ID: 4A_glucanotrans.
  
 
 0.571
aga
COG family: alpha-galactosidase; Orthologue of BL1518; melibiase.
   
 
 0.571
BAD_1528
Alpha-galactosidase; Orthologue of PPA2057.
   
 
 0.565
cscA
Beta-fructofuranosidase (Sucrase/invertase); COG family: beta-fructosidases(levanase_invertase); Orthologue of BL0105; PFAM_ID: Glyco_hydro_32; Belongs to the glycosyl hydrolase 32 family.
  
 
  0.535
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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