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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAD_1069Widely conserved protein similar to those annotated as GTP-binding elongation factor TypA/BipA; COG family: predicted membrane GTPase involved instress response; Orthologue of BL1379; PFAM_ID: GTP_EFTU. (643 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase [NADPH] large subunit; Orthologue of Rv3859c_BL0834; ProbablegltB_ ferredoxin-dependent glutamate synthase largesubunit (EC 1.4.1.13).
   
  
 0.782
engA
GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.687
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.661
BAD_1068
Hypothetical protein; Orthologue of BL1380.
       0.654
rplA
50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
   
    0.642
BAD_0818
Probable helicase; Identified by sequence similarity; Orthologue of Lxx08340_BL0742.
      
 0.597
rpmI
COG family: ribosomal protein L35; Orthologue of BL1366a; PFAM_ID:Ribosomal_L35p; Belongs to the bacterial ribosomal protein bL35 family.
  
    0.596
infC
Translation initiation factor If-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
  
 
 0.592
tyrA
COG family: prephenate dehydrogenase; Orthologue of BL1382; PFAM_ID: PDH.
       0.590
pheA
Probable chorismate mutase; COG family: prephenate dehydratase; Orthologue of BL1381; PFAM_ID: ACT; PFAM_ID:PDT.
       0.590
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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