Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAD_1306Hypothetical protein; COG family: superfamily I DNA and RNA helicases; Orthologue of BL1197. (1065 aa)    
Predicted Functional Partners:
BAD_1305
Widely conserved ATP-dependent DNA helicase; COG family: superfamily I DNA and RNA helicases; Orthologue of BL1196; PFAM_ID:UvrD-helicase; Belongs to the helicase family. UvrD subfamily.
 
  
 0.973
BAD_0953
Hypothetical protein; Orthologue of BL0051.
 
 
  0.850
BAD_0913
Hypothetical protein; Orthologue of BL1050.
 
 
  0.835
BAD_0250
Hypothetical protein; Orthologue of BL1532.
  
     0.773
BAD_1620
Hypothetical protein; Orthologue of BL0652.
  
     0.772
BAD_1106
Hypothetical protein; COG family: UDP-N-acetylmuramyl tripeptidesynthase; Orthologue of BL1318.
  
    0.771
BAD_0775
Hypothetical protein; COG family: periplasmic sugar-binding proteins; Orthologue of BL1498.
  
     0.768
BAD_0810
Hypothetical protein; Orthologue of BL0734.
  
     0.767
BAD_0954
Hypothetical protein; Orthologue of BL0050.
  
     0.766
BAD_0660
Hypothetical protein; COG family: predicted glycosyltransferases; Orthologue of BL1007.
  
     0.758
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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