Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
BAD_1600Transposase; Orthologue of BH3445. (144 aa)    
Predicted Functional Partners:
BAD_1601
Identified by match to protein family HMM PF03372; Orthologue of BURPS1710b_A0408.
       0.522
pknB-2
COG family: serine_threonine protein kinases; Orthologue of HTA426; PFAM_ID: pkinase.
  
     0.505
BAD_1521
Hypothetical protein; COG family: predicted glutamine amidotransferase; Orthologue of BL0195.
  
     0.501
BAD_0969
Hypothetical protein; Orthologue of BL1548.
  
     0.481
BAD_1369
ISSdy1_ transposase OrfB; Identified by match to PFAM protein family HMMPF00665; Orthologue of SAG1229.
 
    0.432
BAD_0509
Transposase; Orthologue of ABC3794.
 
    0.424
BAD_1317
Hypothetical protein; Orthologue of ACIAD0295.
  
     0.424
Your Current Organism:
Bifidobacterium adolescentis
NCBI taxonomy Id: 367928
Other names: B. adolescentis ATCC 15703, Bifidobacterium adolescentis ATCC 15703, Bifidobacterium adolescentis str. ATCC 15703, Bifidobacterium adolescentis strain ATCC 15703
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