STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ33116.1Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)    
Predicted Functional Partners:
APZ34576.1
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.724
APZ33115.1
Type III polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.643
APZ33113.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.636
APZ33114.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.634
APZ35120.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.617
APZ35679.1
S-adenosylmethionine--2-demethylmenaquinone methyltransferase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
       0.573
APZ33339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.567
APZ33597.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.567
APZ35104.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.567
APZ35105.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.567
Your Current Organism:
Microbacterium aurum
NCBI taxonomy Id: 36805
Other names: ATCC 51345, CIP 103994, DSM 8600, IFO 15204, JCM 9179, M. aurum, NBRC 15204, strain H-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.