Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APZ33554.1 | APZ33555.1 | BOH66_04155 | BOH66_04160 | Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.656 |
APZ33554.1 | APZ33557.1 | BOH66_04155 | BOH66_04170 | Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate--nucleotide phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
APZ33554.1 | menD | BOH66_04155 | BOH66_04165 | Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.635 |
APZ33555.1 | APZ33554.1 | BOH66_04160 | BOH66_04155 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.656 |
APZ33555.1 | APZ33557.1 | BOH66_04160 | BOH66_04170 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphate--nucleotide phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
APZ33555.1 | menD | BOH66_04160 | BOH66_04165 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.843 |
APZ33557.1 | APZ33554.1 | BOH66_04170 | BOH66_04155 | Phosphate--nucleotide phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
APZ33557.1 | APZ33555.1 | BOH66_04170 | BOH66_04160 | Phosphate--nucleotide phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
APZ33557.1 | menD | BOH66_04170 | BOH66_04165 | Phosphate--nucleotide phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.703 |
menD | APZ33554.1 | BOH66_04165 | BOH66_04155 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.635 |
menD | APZ33555.1 | BOH66_04165 | BOH66_04160 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.843 |
menD | APZ33557.1 | BOH66_04165 | BOH66_04170 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | Phosphate--nucleotide phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |