STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ34132.1Glycosyl/glycerophosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (418 aa)    
Predicted Functional Partners:
APZ34133.1
Glycosyl/glycerophosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.847
APZ35032.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.569
APZ34131.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.551
APZ34142.1
UDP-N-acetylglucosamine pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.532
APZ33282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
  
     0.513
BOH66_03155
tRNA-Gly; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
  
     0.469
APZ35028.1
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.456
APZ34872.1
Fucose 4-O-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.439
APZ33173.1
Aminoglycoside phosphotransferase APH(3'); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
APZ34073.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.411
Your Current Organism:
Microbacterium aurum
NCBI taxonomy Id: 36805
Other names: ATCC 51345, CIP 103994, DSM 8600, IFO 15204, JCM 9179, M. aurum, NBRC 15204, strain H-5
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