STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ34538.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)    
Predicted Functional Partners:
APZ35305.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
APZ33003.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
APZ33870.1
Large exoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
APZ35020.1
Ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
APZ33801.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
APZ35001.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
APZ34093.1
Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.755
BOH66_09065
Single-stranded DNA-binding protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
APZ35967.1
DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
APZ35314.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
Your Current Organism:
Microbacterium aurum
NCBI taxonomy Id: 36805
Other names: ATCC 51345, CIP 103994, DSM 8600, IFO 15204, JCM 9179, M. aurum, NBRC 15204, strain H-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.