STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXZ61531.1Hypothetical protein. (196 aa)    
Predicted Functional Partners:
KXZ61532.1
Hypothetical protein.
       0.773
ytrA_2
HTH-type transcriptional repressor YtrA.
       0.773
ftsQ
Cell division protein FtsQ; Essential cell division protein.
       0.539
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.539
Your Current Organism:
Microbacterium laevaniformans
NCBI taxonomy Id: 36807
Other names: ATCC 15953, CIP 100934, Corynebacterium laevaniformans, DSM 20140, IFO 14471, JCM 9181, M. laevaniformans, NBRC 14471, NCIB 9659, NCIB:9659, NCIMB 9659
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.