STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppB_2Dipeptide transport system permease protein DppB. (363 aa)    
Predicted Functional Partners:
gsiD
Glutathione transport system permease protein GsiD.
 
 0.975
gsiA_3
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.972
ddpA
Putative D,D-dipeptide-binding periplasmic protein DdpA precursor.
 
  0.963
oppC
Oligopeptide transport system permease protein OppC.
 
 0.942
oppD
Oligopeptide transport ATP-binding protein OppD.
 
 0.931
ddpC
Putative D,D-dipeptide transport system permease protein DdpC.
 
 0.928
nikC
Nickel transport system permease protein NikC.
 
 
 0.925
gsiA_1
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 0.872
gsiA_2
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
 
 0.854
oppF
Oligopeptide transport ATP-binding protein OppF.
 
 0.852
Your Current Organism:
Microbacterium laevaniformans
NCBI taxonomy Id: 36807
Other names: ATCC 15953, CIP 100934, Corynebacterium laevaniformans, DSM 20140, IFO 14471, JCM 9181, M. laevaniformans, NBRC 14471, NCIB 9659, NCIB:9659, NCIMB 9659
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.