Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
aftAArabinofuranosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (630 aa)    
Predicted Functional Partners:
embC_1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.967
ANO22338.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.902
dprE1
decaprenylphosphoryl-beta-D-ribose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.898
embC_2
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.799
glfT2
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.770
ANO22340.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.751
ANO22332.1
Arabinosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.700
ANO26345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.658
ANO25019.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.634
ANO22322.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.629
Your Current Organism:
Mycobacteroides abscessus
NCBI taxonomy Id: 36809
Other names: ATCC 19977, CCUG 20993, CIP 104536, DSM 44196, JCM 13569, M. abscessus, Mycobacterium abscessus, Mycobacterium chelonae subsp. abscessus, Mycobacterium chelonei subsp. abscessus, NCTC 13031, strain Hauduroy L948
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