Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
corC_1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)    
Predicted Functional Partners:
era
GTPase Era; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.966
ANO23751.1
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.963
ybeY
rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.949
ybeZ
Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.924
ANO26330.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.901
dnaJ_1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.684
ANO22719.1
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.628
ytfL
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.610
ANO25544.1
Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.601
ANO23747.1
16S rRNA (uracil(1498)-N(3))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.558
Your Current Organism:
Mycobacteroides abscessus
NCBI taxonomy Id: 36809
Other names: ATCC 19977, CCUG 20993, CIP 104536, DSM 44196, JCM 13569, M. abscessus, Mycobacterium abscessus, Mycobacterium chelonae subsp. abscessus, Mycobacterium chelonei subsp. abscessus, NCTC 13031, strain Hauduroy L948
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