STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aprXSerine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)    
Predicted Functional Partners:
ANO25825.1
Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.855
ANO25826.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.777
ANO25824.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.698
ANO23140.1
Magnesium-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.590
ANO25823.1
Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.576
ANO23200.1
Phosphopeptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.460
ANO22820.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.453
ANO24920.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.453
ANO23906.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.443
pknB_2
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.436
Your Current Organism:
Mycobacteroides abscessus
NCBI taxonomy Id: 36809
Other names: ATCC 19977, CCUG 20993, CIP 104536, DSM 44196, JCM 13569, M. abscessus, Mycobacterium abscessus, Mycobacterium chelonae subsp. abscessus, Mycobacterium chelonei subsp. abscessus, NCTC 13031, strain Hauduroy L948
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