STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prr_2Gamma-aminobutyraldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)    
Predicted Functional Partners:
alkJ
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.914
betA_4
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.914
prr_1
Gamma-aminobutyraldehyde dehydrogenase; Catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.907
ANO23455.1
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.883
tynA
Tyramine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the copper/topaquinone oxidase family.
 
 
 0.812
ANO26140.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.783
ANO26139.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.775
puuE_1
4-aminobutyrate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.674
ANO24137.1
Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.611
gabD_1
NAD-dependent succinate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
 
    
0.575
Your Current Organism:
Mycobacteroides abscessus
NCBI taxonomy Id: 36809
Other names: ATCC 19977, CCUG 20993, CIP 104536, DSM 44196, JCM 13569, M. abscessus, Mycobacterium abscessus, Mycobacterium chelonae subsp. abscessus, Mycobacterium chelonei subsp. abscessus, NCTC 13031, strain Hauduroy L948
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