STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEJ30601.1Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
OEJ30600.1
PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.896
OEJ30599.1
Serine/arginine repetitive matrix protein 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
OEJ35222.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.675
OEJ30702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.492
OEJ33783.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.
  
 0.492
OEJ36013.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.492
OEJ34704.1
Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.
  
 0.492
OEJ35407.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.485
OEJ30373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.485
OEJ30380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.485
Your Current Organism:
Streptomyces subrutilus
NCBI taxonomy Id: 36818
Other names: ATCC 27467, BCRC 11921, CBS 689.72, CCRC 11921, CCRC:11921, DSM 40445, IFO 13388, ISP 5445, JCM 4695, JCM 4834, KCTC 9045, NBRC 13388, NRRL B-12377, NRRL-ISP 5445, S. subrutilus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.