STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEJ34005.1Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)    
Predicted Functional Partners:
OEJ34004.1
Type VII secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.960
OEJ34003.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.937
OEJ34006.1
Type VII secretion-associated serine protease mycosin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
 
 
 0.936
OEJ34010.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.905
OEJ34011.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.875
OEJ35404.1
Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.780
OEJ30671.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.780
OEJ33552.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.
   
 0.780
OEJ32570.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.714
OEJ34008.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
  
 
 0.705
Your Current Organism:
Streptomyces subrutilus
NCBI taxonomy Id: 36818
Other names: ATCC 27467, BCRC 11921, CBS 689.72, CCRC 11921, CCRC:11921, DSM 40445, IFO 13388, ISP 5445, JCM 4695, JCM 4834, KCTC 9045, NBRC 13388, NRRL B-12377, NRRL-ISP 5445, S. subrutilus
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