STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN56143.1KEGG: mac:MA0173 hypothetical protein. (142 aa)    
Predicted Functional Partners:
ABN56144.1
PFAM: protein of unknown function DUF86; KEGG: mma:MM1473 hypothetical protein.
 
 
 
 0.978
ABN57518.1
PFAM: protein of unknown function DUF86; KEGG: mma:MM1473 hypothetical protein.
 
 
 
 0.932
ABN56142.1
Hypothetical protein; KEGG: mac:MA0102 nucleotidyltransferase.
     
 0.782
ABN56477.1
PFAM: protein of unknown function DUF86; KEGG: mth:MTH304 hypothetical protein.
 
 
 
 0.777
ABN56145.1
Hypothetical protein.
       0.732
ABN58312.1
PFAM: polysaccharide biosynthesis protein; KEGG: mma:MM1643 oligosaccharide repeat unit transporter.
 
     0.499
ABN56607.1
PFAM: polysaccharide biosynthesis protein; KEGG: mma:MM1643 oligosaccharide repeat unit transporter.
 
     0.436
ABN57358.1
KEGG: mhu:Mhun_2995 hypothetical protein.
 
     0.422
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.