STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN56264.1PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: mac:MA4220 coenzyme F420-dependent oxidoreductase. (339 aa)    
Predicted Functional Partners:
ABN56265.1
PFAM: glutamate synthase, alpha subunit domain protein; KEGG: mma:MM0968 glutamate synthase, large chain.
  
    0.991
ABN58099.1
Coenzyme F420-reducing hydrogenase, gamma subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mhu:Mhun_2330 coenzyme F420 hydrogenase.
 
 0.988
ABN58097.1
Coenzyme F420-reducing hydrogenase, alpha subunit; PFAM: nickel-dependent hydrogenase, large subunit; KEGG: mhu:Mhun_2332 nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.982
mer
Methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
 
 
 0.953
mtd
Methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
  
 
 0.946
ABN58098.1
Coenzyme F420-reducing hydrogenase, delta subunit; TIGRFAM: hydrogenase maturation protease; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52, hydrogen uptake protein; KEGG: mhu:Mhun_2331 peptidase M52, hydrogenase maturation peptidase.
  
 
 0.919
ABN56888.1
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mtp:Mthe_0959 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
  
 
0.916
ABN58100.1
PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: mhu:Mhun_2329 coenzyme F420 hydrogenase/dehydrogenase beta subunit-like.
  
  
0.915
ABN56266.1
Glutamate synthase (NADPH) GltB2 subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; KEGG: mac:MA4218 glutamine-pyruvate aminotransferase; Belongs to the glutamate synthase family.
  
    0.865
ABN56267.1
PFAM: glutamine amidotransferase, class-II; KEGG: mhu:Mhun_0780 glutamine amidotransferase, class-II.
  
    0.837
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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