STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN56299.1Protein of unknown function DUF362; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: dsy:DSY4491 hypothetical protein. (392 aa)    
Predicted Functional Partners:
ABN56300.1
RNAse III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: sco:SCO5572 ribonuclease III.
       0.792
ABN56298.1
PFAM: histidine triad (HIT) protein; KEGG: swo:Swol_1000 hypothetical protein.
       0.633
ABN56301.1
Hypothetical protein.
       0.573
ABN56292.1
Ech hydrogenase subunit F; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mhu:Mhun_1746 4Fe-4S ferredoxin, iron-sulfur binding.
 
     0.540
ABN57541.1
ExsB family protein; PFAM: asparagine synthase; phosphoadenosine phosphosulfate reductase; thiamine biosynthesis protein; ExsB family protein; PP-loop domain protein; KEGG: mta:Moth_2511 hypothetical protein.
 
     0.445
ABN58081.1
PFAM: protein of unknown function DUF111; KEGG: mhu:Mhun_2452 protein of unknown function DUF111; Belongs to the LarC family.
 
     0.445
ABN57966.1
PFAM: protein of unknown function DUF362; KEGG: afu:AF2235 hypothetical protein.
  
     0.429
ABN56293.1
Ech hydrogenase subunit E; PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; KEGG: mhu:Mhun_1745 NADH-ubiquinone oxidoreductase, chain 49kDa.
       0.402
ABN56295.1
Ech hydrogenase subunit C; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mhu:Mhun_1743 NADH ubiquinone oxidoreductase, 20 kDa subunit.
       0.402
ABN56296.1
PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: mhu:Mhun_1742 respiratory-chain NADH dehydrogenase, subunit 1.
       0.402
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.