Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABN56415.1Serine/threonine protein kinase; PFAM: protein of unknown function RIO1; KEGG: mhu:Mhun_2603 protein of unknown function RIO1. (285 aa)    
Predicted Functional Partners:
ABN56207.1
KEGG: mhu:Mhun_0974 nucleic acid-binding protein, containing PIN domain and zinc-ribbon module.
   
 0.996
rps11
SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
  
 0.972
rps6e
PFAM: ribosomal protein S6e; KEGG: mhu:Mhun_2488 ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.968
ABN58421.1
PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mhu:Mhun_2465 KH, type 1.
   
 
 0.967
rps5
SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy.
 
 0.963
rps15
PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: mhu:Mhun_2511 ribosomal S13S15-like.
  
 
 0.961
ABN56414.1
PFAM: Protein of unknown function DUF460; KEGG: mhu:Mhun_2604 protein of unknown function DUF460.
 
     0.961
ABN58420.1
PFAM: protein of unknown function RIO1; KEGG: mhu:Mhun_2464 protein of unknown function RIO1.
  
0.959
rps3ae
PFAM: ribosomal protein S3Ae; KEGG: mhu:Mhun_2508 ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.955
rps3
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.954
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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