STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN56657.1PFAM: glycosyl transferase, family 2; KEGG: mhu:Mhun_1598 glycosyl transferase, family 2. (239 aa)    
Predicted Functional Partners:
ABN56656.1
PFAM: conserved hypothetical protein 374; KEGG: mhu:Mhun_1599 conserved hypothetical protein 374.
     0.996
ABN56658.1
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mhu:Mhun_1597 amine oxidase.
 
    0.972
ABN56655.1
KEGG: mhu:Mhun_1600 hypothetical protein.
 
  
 0.867
cetZ-2
Tubulin/FtsZ, GTPase; Involved in cell shape control; Belongs to the CetZ family.
 
   
 0.747
ABN57589.1
PFAM: glycosyl transferase, family 2; KEGG: mac:MA4330 dolichyl-phosphate beta-D-mannosyltransferase.
 
  
 0.715
ABN56660.1
KEGG: mhu:Mhun_1595 hypothetical protein.
       0.677
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
       0.487
ABN58343.1
KEGG: mhu:Mhun_1600 hypothetical protein.
 
  
 0.485
rpl7ae
LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
       0.478
rpl24e
LSU ribosomal protein L24E; Binds to the 23S rRNA.
       0.476
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.