STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN56742.1ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: deh:cbdb_A1289 ABC transporter, ATP-binding protein. (308 aa)    
Predicted Functional Partners:
ABN56743.1
PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: det:DET1340 ABC transporter, permease protein, putative.
  
 
 0.871
ABN57300.1
ABC transporter-related protein; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_1097 efflux ABC transporter, permease/ATP-binding protein.
 
0.727
ABN56260.1
TIGRFAM: daunorubicin resistance ABC transporter, inner membrane subunit B; PFAM: ABC-2 type transporter; KEGG: mhu:Mhun_1528 ABC-2.
 
  
 0.612
ABN56176.1
PFAM: ABC-2 type transporter; KEGG: mac:MA4681 multidrug ABC transporter, permease protein.
 
  
 0.576
ABN55957.1
PFAM: ABC-2 type transporter; KEGG: mhu:Mhun_0243 ABC-2.
 
  
 0.573
ABN58000.1
KEGG: afu:AF1137 ABC-2 type transport system permease protein.
 
 
 0.564
ABN57508.1
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sus:Acid_3740 MATE efflux family protein.
  
  
 0.563
ABN57635.1
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mma:MM0344 putative cation efflux pump.
  
  
 0.563
ABN56021.1
PFAM: ABC-2 type transporter; KEGG: mac:MA4359 hypothetical protein.
 
 
 0.559
ABN57998.1
KEGG: mac:MA1547 putative ABC-2 type transport system permease protein.
 
 
 0.557
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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