STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN56884.1Hypothetical protein; KEGG: mba:Mbar_A1967 putative archaeal flagellar protein FlaF. (159 aa)    
Predicted Functional Partners:
ABN56885.1
KEGG: mhu:Mhun_0101 hypothetical protein.
  
 
 0.996
ABN56881.1
PFAM: type II secretion system protein; KEGG: mhu:Mhun_0105 type II secretion system protein.
  
  
 0.967
ABN56882.1
PFAM: type II secretion system protein E; KEGG: mhu:Mhun_0104 type II secretion system protein E.
  
  
 0.962
ABN56883.1
KEGG: mhu:Mhun_0103 putative flagellar protein FlaH.
  
  
 0.961
ABN56886.1
KEGG: mhu:Mhun_0100 hypothetical protein.
       0.858
ABN56880.1
Hypothetical protein.
       0.799
ABN56878.1
PFAM: response regulator receiver; KEGG: mhu:Mhun_0108 response regulator receiver domain protein (CheY-like).
  
  
 0.764
ABN56879.1
KEGG: mhu:Mhun_0107 hypothetical protein.
       0.669
ABN56875.1
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: mhu:Mhun_0110 CheA signal transduction histidine kinases.
  
    0.659
cheD
CheD, stimulates methylation of MCP protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
    0.653
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.