Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABN56892.1PFAM: protein of unknown function DUF354; KEGG: mba:Mbar_A0053 hypothetical protein. (368 aa)    
Predicted Functional Partners:
ABN56893.1
PFAM: glycosyl transferase, family 2; KEGG: mhu:Mhun_3161 glycosyl transferase, family 2.
 
  
 0.877
ABN56891.1
Hypothetical protein; KEGG: pho:PH0429 Vi polysaccharide biosynthesis protein.
     
 0.815
ABN56890.1
PFAM: glycosyl transferase, group 1; KEGG: mac:MA1062 polysaccharide biosynthesis protein.
       0.745
ABN57528.1
KEGG: mac:MA0151 hypothetical protein.
 
     0.702
ABN58236.1
KEGG: mac:MA0313 hypothetical protein.
 
     0.606
ABN58237.1
KEGG: mac:MA0313 hypothetical protein.
 
     0.579
ABN58235.1
KEGG: mma:MM1125 hypothetical protein.
 
     0.577
ABN57267.1
KEGG: mba:Mbar_A1113 hypothetical protein.
 
     0.556
ABN58155.1
Serine O-acetyltransferase; KEGG: mhu:Mhun_2143 transferase hexapeptide repeat.
 
    0.536
ABN57537.1
PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: mbu:Mbur_1593 polysaccharide biosynthesis protein.
 
   
 0.482
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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