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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN56940.1PFAM: nickel-dependent hydrogenase, large subunit; KEGG: det:DET0615 hydrogenase, group 3, VhuA subunit, putative; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (455 aa)    
Predicted Functional Partners:
ABN56941.1
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mka:MK0267 coenzyme F420-reducing hydrogenase, gamma subunit.
 
 0.999
ABN56556.1
CoB--CoM heterodisulfide reductase subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 0.995
ABN56555.1
PFAM: methyl-viologen-reducing hydrogenase, delta subunit; KEGG: mhu:Mhun_1842 methyl-viologen-reducing hydrogenase, delta subunit.
 
 
 0.991
ABN56557.1
CoB--CoM heterodisulfide reductase subunit B; PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: mhu:Mhun_1837 protein of unknown function DUF224, cysteine-rich region.
 
 0.989
ABN56558.1
CoB--CoM heterodisulfide reductase subunit C; KEGG: mhu:Mhun_1836 4Fe-4S ferredoxin, iron-sulfur binding.
 
 0.989
ABN57620.1
4Fe-4S ferredoxin, iron-sulfur binding domain protein; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 0.986
ABN58099.1
Coenzyme F420-reducing hydrogenase, gamma subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: mhu:Mhun_2330 coenzyme F420 hydrogenase.
 
 
 0.961
hypA
Hydrogenase expression/synthesis, HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.926
ABN58100.1
PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: mhu:Mhun_2329 coenzyme F420 hydrogenase/dehydrogenase beta subunit-like.
  
 
 0.924
ABN56943.1
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dvu:DVU3276 ferredoxin I.
 
  
 0.854
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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