STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN57405.1KEGG: rxy:Rxyl_1837 hypothetical protein. (670 aa)    
Predicted Functional Partners:
ABN57404.1
KEGG: rxy:Rxyl_1836 hypothetical protein.
 
 
 
 0.987
ABN57406.1
KEGG: mgm:Mmc1_1281 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase.
 
     0.892
ABN57547.1
KEGG: mtp:Mthe_0316 hypothetical protein.
   
 
 0.791
ABN57409.1
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mma:MM0193 type III restriction-modification system methylation subunit.
 
     0.614
ABN57408.1
PFAM: type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: aeh:Mlg_1542 DEAD/DEAH box helicase domain protein.
 
     0.566
ABN57407.1
PFAM: protein of unknown function DUF55; KEGG: mhu:Mhun_1515 protein of unknown function DUF55; Belongs to the UPF0310 family.
       0.493
ABN56450.1
KEGG: mhu:Mhun_1945 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase.
 
     0.490
ABN57403.1
KEGG: ath:At4g13750 expressed protein.
       0.463
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.