node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABN56382.1 | ABN56722.1 | Memar_0449 | Memar_0789 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | 0.999 |
ABN56382.1 | ABN57324.1 | Memar_0449 | Memar_1395 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | DNA-directed RNA polymerase, subunit M; TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: afu:AF1235 DNA-directed RNA polymerase subunit M; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.980 |
ABN56382.1 | ABN57602.1 | Memar_0449 | Memar_1675 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | DNA-directed RNA polymerase, subunit P; SMART: RNA polymerase Rbp10; KEGG: mhu:Mhun_2285 RNA polymerase Rbp10. | 0.992 |
ABN56382.1 | ABN57734.1 | Memar_0449 | Memar_1808 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | DNA-directed RNA polymerase, subunit K; PFAM: RNA polymerase Rpb6; KEGG: mhu:Mhun_2894 RNA polymerase Rpb6. | 0.993 |
ABN56382.1 | rpoD | Memar_0449 | Memar_1803 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | DNA-directed RNA polymerase, subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | 0.993 |
ABN56382.1 | rpoN | Memar_0449 | Memar_1807 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | DNA-directed RNA polymerase, subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.989 |
ABN56382.1 | tbp | Memar_0449 | Memar_1252 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.958 |
ABN56382.1 | tbp-2 | Memar_0449 | Memar_1388 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.958 |
ABN56382.1 | tfb | Memar_0449 | Memar_0473 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.997 |
ABN56382.1 | tfe | Memar_0449 | Memar_1524 | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | Transcription factor IIE (TFIIE), alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elo [...] | 0.999 |
ABN56722.1 | ABN56382.1 | Memar_0789 | Memar_0449 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: lbu:LBUL_1663 DNA or RNA helicase of superfamily II. | 0.999 |
ABN56722.1 | ABN57324.1 | Memar_0789 | Memar_1395 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | DNA-directed RNA polymerase, subunit M; TIGRFAM: transcription factor S; PFAM: Transcription factor TFIIS; DNA-directed RNA polymerase, M/15 kDa subunit; KEGG: afu:AF1235 DNA-directed RNA polymerase subunit M; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.977 |
ABN56722.1 | ABN57602.1 | Memar_0789 | Memar_1675 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | DNA-directed RNA polymerase, subunit P; SMART: RNA polymerase Rbp10; KEGG: mhu:Mhun_2285 RNA polymerase Rbp10. | 0.985 |
ABN56722.1 | ABN57734.1 | Memar_0789 | Memar_1808 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | DNA-directed RNA polymerase, subunit K; PFAM: RNA polymerase Rpb6; KEGG: mhu:Mhun_2894 RNA polymerase Rpb6. | 0.987 |
ABN56722.1 | rpoD | Memar_0789 | Memar_1803 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | DNA-directed RNA polymerase, subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | 0.985 |
ABN56722.1 | rpoN | Memar_0789 | Memar_1807 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | DNA-directed RNA polymerase, subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.985 |
ABN56722.1 | tbp | Memar_0789 | Memar_1252 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.959 |
ABN56722.1 | tbp-2 | Memar_0789 | Memar_1388 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | TATA binding protein of transcription factor TFIID; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.956 |
ABN56722.1 | tfb | Memar_0789 | Memar_0473 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | Transcription initiation factor IIB (TFIIB); Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB). | 0.986 |
ABN56722.1 | tfe | Memar_0789 | Memar_1524 | SMART: DEXDc2; helicase c2; DEAD-like helicases-like; KEGG: mhu:Mhun_0965 helicase C2. | Transcription factor IIE (TFIIE), alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elo [...] | 0.997 |