STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN57678.1Hypothetical protein; KEGG: mhu:Mhun_0418 PKD. (538 aa)    
Predicted Functional Partners:
ABN57676.1
Outer membrane lipoprotein-sorting protein-like protein; KEGG: mac:MA4325 hypothetical protein.
       0.773
ABN57677.1
Hypothetical protein.
       0.773
ABN57681.1
KEGG: mtp:Mthe_0738 hypothetical protein.
 
     0.753
ABN56079.1
Hypothetical protein; KEGG: mhu:Mhun_0418 PKD.
  
     0.577
ABN57679.1
KEGG: ttj:TTHA0285 hypothetical protein.
       0.423
ABN57682.1
Transcriptional regulator, ArsR family; PFAM: regulatory protein, MarR; regulatory protein, ArsR; PaaX domain protein; KEGG: mbu:Mbur_0231 transcriptional regulator, ArsR family.
 
     0.400
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.