STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN57683.1PFAM: GCN5-related N-acetyltransferase; KEGG: mhu:Mhun_2753 GCN5-related N-acetyltransferase. (111 aa)    
Predicted Functional Partners:
ABN57684.1
PFAM: heat shock protein Hsp20; KEGG: mhu:Mhun_0154 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
  
 0.544
ABN57422.1
RNAse III; PFAM: ribonuclease III; KEGG: aha:AHA_0800 ribonuclease III.
 
    0.499
ABN55972.1
RNAse III; PFAM: ribonuclease III; KEGG: mhu:Mhun_1116 ribonuclease III.
  
    0.432
ABN56300.1
RNAse III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: sco:SCO5572 ribonuclease III.
  
    0.432
ABN56374.1
Hypothetical protein.
  
    0.432
ABN57637.1
PFAM: ribonuclease III.
  
    0.432
ABN58332.1
Hypothetical protein.
  
    0.432
ABN58197.1
PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: mhu:Mhun_1500 protein of unknown function DUF523.
 
  
 0.427
ABN57554.1
Predicted D-glycerate permease; PFAM: Gluconate transporter; KEGG: mbu:Mbur_0471 gluconate transporter; TC 2.A.8.1.6.
 
  
 0.407
ABN57682.1
Transcriptional regulator, ArsR family; PFAM: regulatory protein, MarR; regulatory protein, ArsR; PaaX domain protein; KEGG: mbu:Mbur_0231 transcriptional regulator, ArsR family.
       0.406
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.