STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN57834.1PFAM: Cache, type 2 domain protein; KEGG: mhu:Mhun_0349 signal transduction histidine kinase-like. (183 aa)    
Predicted Functional Partners:
ABN56174.1
PFAM: CheW domain protein; KEGG: mhu:Mhun_0496 CheW protein.
 
 
 0.898
ABN57473.1
PFAM: CheW domain protein; KEGG: mhu:Mhun_2550 CheW protein.
  
 
 0.883
ABN56805.1
KEGG: mhu:Mhun_1309 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.720
ABN56878.1
PFAM: response regulator receiver; KEGG: mhu:Mhun_0108 response regulator receiver domain protein (CheY-like).
  
 
 0.694
ABN57950.1
PFAM: response regulator receiver; KEGG: mhu:Mhun_2638 response regulator receiver domain protein (CheY-like).
  
 
 0.694
ABN58048.1
PFAM: CheB methylesterase; KEGG: mhu:Mhun_0952 CheB methylesterase.
 
 
 0.586
ABN57474.1
Protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase, CheR-type; KEGG: mhu:Mhun_0961 MCP methyltransferase, CheR-type.
  
 
 0.582
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.574
ABN57833.1
PFAM: PKD domain containing protein; glycosyl hydrolase, BNR repeat-containing protein; Kelch repeat-containing protein; Kelch repeat protein; KEGG: mhu:Mhun_0420 PKD.
  
  
 0.567
ABN58049.1
PFAM: response regulator receiver; KEGG: gme:Gmet_2827 response regulator receiver domain protein (CheY-like).
  
 
 0.444
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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