Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABN57879.1 | ABN57880.1 | Memar_1953 | Memar_1954 | Hypothetical protein. | PFAM: peptidase S16, lon domain protein; KEGG: mba:Mbar_A1658 ATP-dependent protease La; Belongs to the peptidase S16 family. | 0.636 |
ABN57880.1 | ABN57879.1 | Memar_1954 | Memar_1953 | PFAM: peptidase S16, lon domain protein; KEGG: mba:Mbar_A1658 ATP-dependent protease La; Belongs to the peptidase S16 family. | Hypothetical protein. | 0.636 |
ABN57880.1 | ABN57881.1 | Memar_1954 | Memar_1955 | PFAM: peptidase S16, lon domain protein; KEGG: mba:Mbar_A1658 ATP-dependent protease La; Belongs to the peptidase S16 family. | Methyltransferase type 11; PFAM: putative methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mtp:Mthe_1530 methyltransferase type 11. | 0.463 |
ABN57881.1 | ABN57880.1 | Memar_1955 | Memar_1954 | Methyltransferase type 11; PFAM: putative methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mtp:Mthe_1530 methyltransferase type 11. | PFAM: peptidase S16, lon domain protein; KEGG: mba:Mbar_A1658 ATP-dependent protease La; Belongs to the peptidase S16 family. | 0.463 |