STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN57927.1PFAM: type II secretion system protein; KEGG: mhu:Mhun_3168 type II secretion system protein. (349 aa)    
Predicted Functional Partners:
ABN57928.1
PFAM: type II secretion system protein; KEGG: mhu:Mhun_3169 type II secretion system protein.
  
 0.999
ABN57929.1
PFAM: type II secretion system protein E; KEGG: mhu:Mhun_3170 type II secretion system protein E.
 
  
 0.977
ABN56882.1
PFAM: type II secretion system protein E; KEGG: mhu:Mhun_0104 type II secretion system protein E.
 
  
 0.865
ABN57931.1
PFAM: peptidase A24A, prepilin type IV; KEGG: mhu:Mhun_2921 hypothetical protein.
 
   
 0.810
ABN57846.1
PFAM: PRC-barrel domain protein; KEGG: mhu:Mhun_2938 PRC-barrel.
  
    0.647
ABN56334.1
PFAM: PRC-barrel domain protein; KEGG: mhu:Mhun_0611 PRC-barrel.
  
    0.634
ABN57970.1
PFAM: Protein of unknown function DUF63; KEGG: mhu:Mhun_1137 protein of unknown function DUF63.
  
     0.602
ABN57850.1
Protein of unknown function DUF1119; PFAM: Peptidase A22B, minor histocompatibility antigen H13; Protein of unknown function DUF1119; SMART: Peptidase A22, presenilin signal peptide; KEGG: mhu:Mhun_2519 protein of unknown function DUF1119.
  
     0.584
ABN56166.1
PFAM: Protein of unknown function DUF1621; KEGG: mhu:Mhun_3057 protein of unknown function DUF1621.
  
     0.580
ABN57441.1
PFAM: regulatory protein, ArsR; KEGG: mhu:Mhun_0040 putative transcriptional regulator.
 
     0.541
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.