STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN57929.1PFAM: type II secretion system protein E; KEGG: mhu:Mhun_3170 type II secretion system protein E. (791 aa)    
Predicted Functional Partners:
ABN57927.1
PFAM: type II secretion system protein; KEGG: mhu:Mhun_3168 type II secretion system protein.
 
  
 0.975
ABN57928.1
PFAM: type II secretion system protein; KEGG: mhu:Mhun_3169 type II secretion system protein.
 
  
 0.974
ABN56881.1
PFAM: type II secretion system protein; KEGG: mhu:Mhun_0105 type II secretion system protein.
 
  
 0.943
ABN56883.1
KEGG: mhu:Mhun_0103 putative flagellar protein FlaH.
 
  
 0.882
ABN56885.1
KEGG: mhu:Mhun_0101 hypothetical protein.
  
  
 0.842
ABN57933.1
ATPase, PilT family; PFAM: PilT protein domain protein; KH, type 1, domain protein; SMART: AAA ATPase; Nucleotide binding protein, PINc; KEGG: mhu:Mhun_2922 PilT protein-like.
 
   
 0.750
ABN56884.1
Hypothetical protein; KEGG: mba:Mbar_A1967 putative archaeal flagellar protein FlaF.
  
  
 0.702
ABN57931.1
PFAM: peptidase A24A, prepilin type IV; KEGG: mhu:Mhun_2921 hypothetical protein.
 
   
 0.629
ABN56944.1
Septum site-determining protein MinD; TIGRFAM: cell division ATPase MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mka:MK0218 ATPase involved in chromosome partitioning.
 
  
 0.618
trmY
Protein of unknown function DUF358; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family.
 
    0.547
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.