Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABN57933.1ATPase, PilT family; PFAM: PilT protein domain protein; KH, type 1, domain protein; SMART: AAA ATPase; Nucleotide binding protein, PINc; KEGG: mhu:Mhun_2922 PilT protein-like. (631 aa)    
Predicted Functional Partners:
ABN57931.1
PFAM: peptidase A24A, prepilin type IV; KEGG: mhu:Mhun_2921 hypothetical protein.
 
   
 0.937
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
       0.914
leuS
TIGRFAM: leucyl-tRNA synthetase; KEGG: mhu:Mhun_2923 leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.903
ABN57929.1
PFAM: type II secretion system protein E; KEGG: mhu:Mhun_3170 type II secretion system protein E.
 
   
 0.750
ABN56882.1
PFAM: type II secretion system protein E; KEGG: mhu:Mhun_0104 type II secretion system protein E.
 
   
 0.699
ABN56883.1
KEGG: mhu:Mhun_0103 putative flagellar protein FlaH.
  
   
 0.636
ABN56881.1
PFAM: type II secretion system protein; KEGG: mhu:Mhun_0105 type II secretion system protein.
  
   
 0.626
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
 
     0.619
hisS
KEGG: mhu:Mhun_2918 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.612
ABN57936.1
PFAM: protein of unknown function DUF75; KEGG: mhu:Mhun_0058 hypothetical protein.
  
   
 0.590
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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