STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN57936.1PFAM: protein of unknown function DUF75; KEGG: mhu:Mhun_0058 hypothetical protein. (237 aa)    
Predicted Functional Partners:
ABN57937.1
KEGG: mhu:Mhun_0057 protein of unknown function DUF473.
  
 
 0.993
ABN57358.1
KEGG: mhu:Mhun_2995 hypothetical protein.
 
    0.815
psmA
Proteasome endopeptidase complex; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
   
 
 0.761
ABN56159.1
PFAM: NADPH-dependent FMN reductase; KEGG: mth:MTH1595 hypothetical protein.
  
    0.732
albA
Nucleoid protein Alba; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family.
  
    0.706
ABN57935.1
KEGG: mhu:Mhun_2924 hypothetical protein.
       0.699
psmB
Proteasome endopeptidase complex, beta component, Threonine peptidase, MEROPS family T01A; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
 
 
 
 0.689
ABN57885.1
PFAM: Protein of unknown function DUF655; KEGG: mhu:Mhun_3028 protein of unknown function DUF655.
 
     0.673
ABN57345.1
PFAM: Protein of unknown function UPF0147; KEGG: mhu:Mhun_1710 protein of unknown function UPF0147; Belongs to the UPF0147 family.
 
     0.664
ABN57612.1
PFAM: PUA domain containing protein; KEGG: mhu:Mhun_2275 uncharacterized domain 2.
 
     0.644
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.