Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABN57938.1KEGG: mtp:Mthe_0107 hypothetical protein. (121 aa)    
Predicted Functional Partners:
ABN56992.1
N2-methylguanosine tRNA methyltransferase; PFAM: putative RNA methylase; KEGG: mhu:Mhun_0125 putative RNA methylase.
 
     0.630
ABN57131.1
PFAM: major facilitator superfamily MFS_1; KEGG: mhu:Mhun_0844 major facilitator superfamily MFS_1.
  
     0.615
ABN56569.1
KEGG: mhu:Mhun_1798 hypothetical protein.
  
     0.584
ABN56289.1
PFAM: protein of unknown function UPF0153; KEGG: mma:MM0827 hypothetical protein.
  
     0.583
ABN57936.1
PFAM: protein of unknown function DUF75; KEGG: mhu:Mhun_0058 hypothetical protein.
 
     0.540
ABN57540.1
KEGG: mhu:Mhun_0069 hypothetical protein.
  
     0.493
ABN57746.1
KEGG: mhu:Mhun_0320 hypothetical protein.
  
     0.483
ABN56661.1
PFAM: glycosyl transferase, family 39; KEGG: mhu:Mhun_1594 glycosyl transferase, family 39.
  
     0.471
ABN58355.1
KEGG: mac:MA3400 hypothetical protein.
  
     0.462
ABN56472.1
PFAM: Uroporphyrinogen III synthase HEM4; KEGG: mhu:Mhun_2267 uroporphyrinogen-III synthase-like.
  
     0.440
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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