STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN58062.1TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: mhu:Mhun_2438 carboxylyase-related protein. (413 aa)    
Predicted Functional Partners:
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
 
 0.999
ABN58061.1
Predicted aconitase subunit 1; PFAM: protein of unknown function DUF521; KEGG: mhu:Mhun_2437 protein of unknown function DUF521.
 
     0.951
ABN57739.1
Isopentenyl phosphate kinase; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids.
    
  0.906
ABN58064.1
PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: mhu:Mhun_2443 metal dependent phosphohydrolase.
       0.891
ABN57239.1
Predicted aconitase subunit 2; PFAM: protein of unknown function DUF126; KEGG: mhu:Mhun_1041 protein of unknown function DUF126; Belongs to the UPF0107 family.
 
     0.775
ABN56864.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mhu:Mhun_1169 radical SAM.
       0.703
purE
Phosphoribosylaminoimidazole carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.583
ABN56728.1
Dihydroorotate oxidase B, electron transfer subunit; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mhu:Mhun_1153 oxidoreductase FAD/NAD(P)-binding.
  
  
 0.577
ABN57213.1
Sulfide dehydrogenase (flavoprotein) subunit SudB; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mhu:Mhun_1118 oxidoreductase FAD/NAD(P)-binding.
  
  
 0.577
ABN57356.1
SMART: AAA ATPase; KEGG: mka:MK0077 predicted GTPase or GTP-binding protein.
       0.559
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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