STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN58085.1PFAM: regulatory protein, ArsR; KEGG: mbu:Mbur_0231 transcriptional regulator, ArsR family. (253 aa)    
Predicted Functional Partners:
ABN58084.1
PFAM: peptidase domain protein; KEGG: mba:Mbar_A3376 hypothetical protein.
       0.644
ABN58237.1
KEGG: mac:MA0313 hypothetical protein.
  
     0.613
ABN57267.1
KEGG: mba:Mbar_A1113 hypothetical protein.
  
     0.606
ABN58371.1
KEGG: mbu:Mbur_0128 hypothetical protein.
  
   
 0.595
ABN57362.1
PFAM: GCN5-related N-acetyltransferase; UspA domain protein; KEGG: mtp:Mthe_0923 UspA domain protein.
  
     0.567
ABN58236.1
KEGG: mac:MA0313 hypothetical protein.
  
     0.558
ABN58235.1
KEGG: mma:MM1125 hypothetical protein.
  
     0.554
ABN56079.1
Hypothetical protein; KEGG: mhu:Mhun_0418 PKD.
  
     0.520
ABN57280.1
PFAM: Cupin 2, conserved barrel domain protein; KEGG: mth:MTH352 hypothetical protein.
  
     0.515
ABN58246.1
KEGG: mba:Mbar_A1892 putative small heat shock protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.512
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.