Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABN58106.1KEGG: mhu:Mhun_2166 hypothetical protein. (160 aa)    
Predicted Functional Partners:
ABN55992.1
TIGRFAM: riboflavin synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: mhu:Mhun_2476 riboflavin synthase.
 
     0.690
ABN58107.1
KEGG: mba:Mbar_A3141 hypothetical protein.
       0.622
ABN57985.1
KEGG: mhu:Mhun_2305 hypothetical protein.
  
     0.621
ABN57788.1
KEGG: mtp:Mthe_1086 hypothetical protein.
  
     0.608
ABN57660.1
KEGG: mhu:Mhun_0670 hypothetical protein.
  
     0.601
ABN57990.1
KEGG: mhu:Mhun_2310 hypothetical protein; Belongs to the UPF0288 family.
  
     0.591
ABN57988.1
KEGG: mhu:Mhun_2308 hypothetical protein.
  
     0.587
ABN56547.1
PFAM: Methyl-coenzyme M reductase, gamma subunit; KEGG: mhu:Mhun_2147 methyl-coenzyme M reductase, gamma subunit.
 
     0.586
ABN56488.1
PFAM: Ribonuclease R winged-helix domain protein; KEGG: mhu:Mhun_2259 protein of unknown function DUF128.
 
     0.579
ABN56310.1
PFAM: Methyl-coenzyme M reductase, gamma subunit; KEGG: mhu:Mhun_2147 methyl-coenzyme M reductase, gamma subunit.
 
     0.576
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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