STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN58212.1PFAM: peptidase M20; peptidase M28; KEGG: saz:Sama_3414 aminopeptidase-like protein. (338 aa)    
Predicted Functional Partners:
ABN57719.1
PFAM: GTP-binding protein, HSR1-related; KEGG: mhu:Mhun_2908 small GTP-binding protein domain.
  
 0.607
ABN58211.1
PFAM: glutamine synthetase, catalytic region; KEGG: mac:MA3382 glutamate-ammonia ligase.
 
   
 0.565
ABN58369.1
PFAM: phospholipase D/Transphosphatidylase; KEGG: mhu:Mhun_2347 phospholipase D/transphosphatidylase.
 
  
 0.511
ABN56727.1
SMART: WD-40 repeat protein; Pyrrolo-quinoline quinone; KEGG: mma:MM2469 hypothetical protein.
 
   
 0.491
ABN58213.1
KEGG: mka:MK1676 uncharacterized protein conserved in archaea.
       0.483
ABN58362.1
Cardiolipin synthetase 2; PFAM: phospholipase D/Transphosphatidylase; KEGG: mhu:Mhun_1231 phospholipase D/transphosphatidylase.
    
 0.445
ABN56409.1
SMART: WD-40 repeat protein; KEGG: mac:MA1519 WD-domain containing protein.
 
   
 0.433
ABN57490.1
KEGG: afu:AF1297 cell division control protein 48, AAA family (cdc48-1); TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein domain protein; AAA ATPase, central domain protein; cell division protein 48, CDC48, domain 2; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase.
 
  
 0.415
ABN58016.1
PFAM: peptidase M24; KEGG: mhu:Mhun_2340 peptidase M24; Belongs to the peptidase M24B family.
 
  
 0.411
ABN58031.1
Endothelin-converting enzyme, Metallo peptidase, MEROPS family M13; PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: mba:Mbar_A2834 endothelin converting enzyme homolog PepO.
 
  
 0.410
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.