STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABN58388.1Anti-anti-sigma regulatory factor, SpoIIAA; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mhu:Mhun_0062 anti-sigma-factor antagonist (STAS) domain protein. (118 aa)    
Predicted Functional Partners:
ABN58390.1
PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: mhu:Mhun_0063 putative anti-sigma regulatory factor (serine/threonine protein kinase).
 
 
 0.997
ABN58389.1
PFAM: Stage II sporulation E family protein; 5TM Receptors of the LytS-YhcK type, transmembrane region; SMART: protein phosphatase 2C domain protein; KEGG: swo:Swol_1793 serine phosphatase RsbU regulator of sigma subunit-like protein.
 
 
 0.988
ABN55982.1
FO synthase subunit 2; PFAM: Radical SAM domain protein; KEGG: mhu:Mhun_2410 hypothetical protein.
  
    0.631
cofH
FO synthase subunit 2; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine.
  
    0.631
cofG
FO synthase subunit 1; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil.
  
    0.631
ABN57277.1
KEGG: mhu:Mhun_2642 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.530
ABN56805.1
KEGG: mhu:Mhun_1309 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
  
 0.509
ABN57696.1
Transcriptional regulator, ArsR family; PFAM: Forkhead-associated protein; regulatory protein, ArsR; KEGG: mhu:Mhun_0316 transcriptional regulator, ArsR family.
  
    0.453
ABN56875.1
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: mhu:Mhun_0110 CheA signal transduction histidine kinases.
   
   0.449
ABN56878.1
PFAM: response regulator receiver; KEGG: mhu:Mhun_0108 response regulator receiver domain protein (CheY-like).
  
  
 0.420
Your Current Organism:
Methanoculleus marisnigri
NCBI taxonomy Id: 368407
Other names: M. marisnigri JR1, Methanoculleus marisnigri JR1, Methanoculleus marisnigri str. JR1, Methanoculleus marisnigri strain JR1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.