STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_0164PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: pho:PH0776 methanol dehydrogenase regulatory protein. (319 aa)    
Predicted Functional Partners:
Tpen_0165
PFAM: protein of unknown function DUF58; KEGG: pab:PAB0849 hypothetical protein.
 
  
 0.933
Tpen_0163
Hypothetical protein.
       0.773
Tpen_0166
Hypothetical protein.
       0.773
htpX
PFAM: peptidase M48, Ste24p; KEGG: pai:PAE3461 heat shock protein, htpX homolog, conjectural; Belongs to the peptidase M48B family.
  
  
 0.682
Tpen_1748
KEGG: mxa:MXAN_5665 hypothetical protein.
 
  
 0.682
Tpen_1051
PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; KEGG: mth:MTH577 hypothetical protein.
   
    0.680
Tpen_0162
Hypothetical protein.
       0.548
Tpen_0161
PFAM: Anion-transporting ATPase; KEGG: tvo:TVN0026 arsenite transporting ATPase.
     
 0.466
Tpen_1819
PFAM: Methionine synthase, vitamin-B12 independent; KEGG: mka:MK0667 methionine synthase II (cobalamin-independent).
  
    0.436
Tpen_0160
TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: tma:TM0887 methylated-DNA-protein-cysteine methyltransferase.
       0.407
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.