STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpBSodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (472 aa)    
Predicted Functional Partners:
Tpen_0337
PFAM: V-type ATPase, 116 kDa subunit; KEGG: ctc:CTC02331 V-type sodium ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
Tpen_0338
PFAM: H+-transporting two-sector ATPase, C subunit; KEGG: noc:Noc_2086 H+-transporting two-sector ATPase, C subunit; Belongs to the V-ATPase proteolipid subunit family.
 
 0.999
Tpen_0339
Hypothetical protein.
  
 0.999
Tpen_0340
TIGRFAM: V-type ATPase, D subunit; KEGG: nph:NP0264A H(+)-transporting two-sector ATPase subunit D.a (A-type ATP synthase).
 
 0.999
atpA
Sodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
0.999
Tpen_0811
Hypothetical protein.
  
 0.999
atpE
H+-transporting two-sector ATPase, E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.999
Tpen_0897
Transcriptional regulator, Fis family; KEGG: lma:LmjF34.0690 hypothetical protein, conserved.
  
 0.980
ppa
Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
   
 
 0.941
Tpen_1427
KEGG: lca:LSEI_0125 cation transport ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; plasma-membrane proton-efflux P-type ATPase; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein.
  
 0.926
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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