STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpen_0806Uncharacterized protein probably involved in trehalose biosynthesis-like protein; KEGG: ape:APE2310 hypothetical protein. (441 aa)    
Predicted Functional Partners:
Tpen_1458
Alpha amylase, catalytic region; PFAM: glycoside hydrolase, family 13 domain protein Ig domain protein region domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: pfu:PF1939 neopullulanase (alpha-amylase II).
 
 
 0.860
Tpen_1454
Alpha amylase, catalytic region; PFAM: glycoside hydrolase, starch-binding; cell surface receptor IPT/TIG domain protein; alpha amylase, catalytic region; alpha amylase, C-terminal all-beta; SMART: alpha amylase, catalytic sub domain; KEGG: tko:TK2172 cyclodextrin glucanotransferase, GH13 family.
 
 
 0.859
Tpen_0792
Starch synthase; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: sai:Saci_1201 glycosyl transferase.
 
  
 0.794
Tpen_0807
KEGG: vfi:VFA0477 hypothetical protein.
       0.773
Tpen_1778
PFAM: glycosyl transferase, group 1; KEGG: pai:PAE3422 starch phosphorylase.
 
  
 0.730
Tpen_1156
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pho:PH0749 hypothetical protein.
 
   
 0.560
Tpen_1155
Kojibiose phosphorylase; PFAM: glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein; KEGG: pho:PH0746 putative trehalose/maltose hydrolase.
 
   
 0.537
Tpen_0808
PFAM: type II secretion system protein E; KEGG: ape:APE2208 hypothetical protein.
       0.512
Tpen_0407
KEGG: tko:TK0871 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
     
 0.511
Tpen_1672
PFAM: Glycoside hydrolase, family 42, N-terminal domain protein; KEGG: tvo:TVN0690 hypothetical protein.
  
     0.430
Your Current Organism:
Thermofilum pendens
NCBI taxonomy Id: 368408
Other names: T. pendens Hrk 5, Thermofilum pendens Hrk 5, Thermofilum pendens str. Hrk 5, Thermofilum pendens strain Hrk 5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.